Projects per year
Personal profile
Education/Academic qualification
Biochemistry and Molecular Biology, Doctor of Philosophy (PhD), Generation of truncated proteoforms in proteolytic networks: Modeling and prediction in the protease web, University of British Columbia
1 Jan 2012 → 31 May 2016
Award Date: 1 Sept 2016
Proteomics and Bioinformatics, Master of Science (M.Sc.), Metabolic network analysis: Towards the construction of a meaningful network, University of Geneva, Swiss Institute of Bioinformatics
1 Sept 2009 → 20 Jul 2010
Award Date: 20 Jul 2010
Biology, Bachelor of Science (BSc), University of Vienna
1 Sept 2005 → 20 Jul 2009
Award Date: 20 Jul 2009
External positions
Postdoc, CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences
1 Jul 2016 → 31 Aug 2020
Bioinformatician, Geneva Bioinformatics SA
1 Sept 2010 → 31 Jan 2011
Internship, World Health Organization (WHO) Geneva
1 Feb 2009 → 31 May 2009
Keywords
- QA75 Electronic computers. Computer science
- Systems Biology
- Network Biology
- signaling networks
- Cell-cell communication
- multi-omics
- single-cell data
- interpretable machine learning
- Biology-inspired deep learning
Fields of Science and Technology Classification 2012 (Level 2, 3-digit codes).
- 106 Biology
- 102 Computer Sciences
- 304 Medical Biotechnology
Collaborations and top research areas from the last five years
Recent external collaboration on country/territory level. Dive into details by clicking on the dots or
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DigiTherapeutX: Integrated Digitalized Production of Protein Therapeutics: Linking Molecular Attributes to Process Optimization via Digital Twins
Huber, C. (Principal Investigator), Birner-Grünberger, R. (Co-Investigator), Fortelny, N. (Co-Investigator) & Borth, N. (Co-Investigator)
15/07/22 → 14/07/27
Project: Research
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Interaction Between Birch Pollen And Toll-Like Receptors: Role In Dendritic Cell Responses And Th2 Development
Ferreira-Briza, F. (Principal Investigator), Aglas, L. (Co-Investigator) & Fortelny, N. (Co-Investigator)
1/10/21 → 30/09/25
Project: Research
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Identifying and resolving ancestrality biases : Identifying and resolving ancestrality biases in biomedicine with machine learning
Fortelny, N. (Principal Investigator), Zimmermann, G. (Co-Investigator) & Rodrigues Nunes da Silva, N. (Co-Investigator)
1/01/25 → 30/06/26
Project: Research
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Identifying and resolving ancestrality biases : Identifying and resolving ancestrality biases in biomedicine with machine learning
Zimmermann, G. (Principal Investigator) & Fortelny, N. (Co-Investigator)
1/01/25 → 30/06/26
Project: Research
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WWTF Project LS18-111: Ultra-high-risk pediatric cancer - combinatorial drivers and therapeutic targets for precision medicine
Fortelny, N. (Principal Investigator)
1/09/20 → 28/02/24
Project: Research
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Comparison of critical quality attributes of therapeutic monoclonal antibodies from the NISTCHO cell line under varying critical process parameters
Berger, T., Schäpertöns, V. (Corresponding author), Hofer, L. (Corresponding author), Štor , J. (Corresponding author), Fortelny, N. (Corresponding author), Borth, N. (Corresponding author) & Huber, C. G. (Editor), 7 Oct 2024.Research output: Contribution to conference › Poster
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ADP-heptose attenuates Helicobacter pylori-induced dendritic cell activation
Neuper, T., Frauenlob, T., Dang, H.-H., Krenn, P. W., Posselt, G., Regl, C., Fortelny, N., Schäpertöns, V., Unger, M. S., Üblagger, G., Neureiter, D., Mühlbacher, I., Weitzendorfer, M., Singhartinger, F., Emmanuel, K., Huber, C. G., Wessler, S., Aberger, F. & Horejs-Hoeck, J., 17 Sept 2024, In: Gut Microbes. 16, 1, p. 2402543Research output: Contribution to journal › Article › peer-review
Open Access -
Characterization of Antibody N-glycosylation from a Publicly Available Producer CHO Cell Line: NISTCHO
Berger, T., Rabl, J. (Corresponding author), Schäpertöns, V. (Corresponding author), Hofer, L. (Corresponding author), Štor , J. (Corresponding author), Fortelny, N. (Corresponding author), Borth, N. (Corresponding author) & Huber, C. G. (Editor), 25 Jun 2024.Research output: Contribution to conference › Poster
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Hedgehog-Hippo pathway interactions promote T cell exclusion from the tumor microenvironment in basal cell carcinoma
Stockmaier, G., Varkhande, S., Krenn, P., Dang, H.-H., Sharma, A., Elmer, D. P., Steiner, M., Zaborsky, N., Neureiter, D., Greil, R., Horejs-Hoeck, J., Fortelny, N. & Aberger, F., 2024, bioRxiv.Research output: Working paper/Preprint › Preprint
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Reliable interpretability of biology-inspired deep neural networks
Esser-Skala, W. & Fortelny, N., 10 Oct 2023, In: NPJ Systems Biology and Applications. 9, 1, 50.Research output: Contribution to journal › Article › peer-review
Open Access
Prizes
Activities
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GLI-YAP interactions in basal cell carcinoma promote immune evasion by regulating the spatial distribution of immune responses.
Krenn, P. (Speaker), Stockmaier, G. (Speaker), Varkhande, S. (Speaker), Dang, H.-H. (Speaker), Sharma, A. (Speaker), Elmer, D. P. (Speaker), Steiner, M. (Speaker), Zaborsky, N. (Speaker), Neureiter, D. (Speaker), Greil, R. (Speaker), Horejs-Höck, J. (Speaker), Fortelny, N. (Speaker), Gratz, I. K. (Speaker) & Aberger, F. (Speaker)
12 Dec 2024Activity: Talk or presentation › Poster presentation › science to science / art to art
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ADP-heptose attenuates H. pylori-induced DC activation
Neuper, T. (Speaker), Frauenlob, T. (Speaker), Dang, H.-H. (Speaker), Krenn, P. (Speaker), Posselt, G. B. (Speaker), Regl, C. (Speaker), Fortelny, N. (Speaker), Schäpertöns, V. (Speaker), Unger, M. S. (Speaker), Üblagger, G. L. (Speaker), Neureiter, D. (Speaker), Mühlbacher, I. (Speaker), Weitzendorfer, M. (Speaker), Singhartinger, F. (Speaker), Emmanuel, K. (Speaker), Huber, C. (Speaker), Weßler, S. (Speaker), Aberger, F. (Speaker) & Horejs-Höck, J. (Speaker)
3 Jul 2024 → 6 Jul 2024Activity: Talk or presentation › Poster presentation › science to science / art to art
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Effects of ADP-heptose on human primary dendritic cells
Neuper, T. (Speaker), Frauenlob, T. (Speaker), Dang, H.-H. (Speaker), Posselt, G. B. (Speaker), Regl, C. (Speaker), Krenn, P. (Speaker), Unger, M. S. (Speaker), Huber, C. (Speaker), Aberger, F. (Speaker), Fortelny, N. (Speaker), Weßler, S. (Speaker) & Horejs-Höck, J. (Speaker)
2 Dec 2023 → 5 Dec 2023Activity: Talk or presentation › Oral presentation › science to science / art to art
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Integrative Analyses of Genome-Wide Association Studies to Identify the Genetic Basis of Birch Pollen Allergy.
Rodrigues Nunes da Silva, N. (Participant), Ferreira-Briza, F. (Participant), Aglas, L. (Participant) & Fortelny, N. (Participant)
1 Nov 2023 → 31 Mar 2024Activity: Other scientific activities › Other/Non-externally funded projects
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Bioinformatics (Journal)
Fortelny, N. (Reviewer)
Oct 2023Activity: Publication peer-review and editorial work › Publication Peer-review